From 5d2fb98afa41c9161453edabcb37bfae14638d66 Mon Sep 17 00:00:00 2001
From: levdoescode <levdoescode+sites@gmail.com>
Date: Thu, 15 Dec 2022 23:54:42 -0500
Subject: [PATCH] TDD tests for the genome class

---
 .../Week 8/Files/test_genome.py               | 109 ++++++++++++++++++
 1 file changed, 109 insertions(+)
 create mode 100644 CM3020 Artificial Intelligence/Week 8/Files/test_genome.py

diff --git a/CM3020 Artificial Intelligence/Week 8/Files/test_genome.py b/CM3020 Artificial Intelligence/Week 8/Files/test_genome.py
new file mode 100644
index 0000000..40e3737
--- /dev/null
+++ b/CM3020 Artificial Intelligence/Week 8/Files/test_genome.py	
@@ -0,0 +1,109 @@
+import unittest
+import genome
+import numpy as np
+from xml.dom.minidom import getDOMImplementation
+
+
+class GenomeTest (unittest.TestCase):
+
+    # Class
+    def testClassExists(self):
+        self.assertIsNotNone(genome.Genome)
+
+    # Gene
+    def testRandomGene(self):
+        self.assertIsNotNone(genome.Genome.get_random_gene)
+
+    def testRandomGeneNotNone(self):
+        self.assertIsNotNone(genome.Genome.get_random_gene(1))
+
+    def testRandomGeneHasValues(self):
+        gene = genome.Genome.get_random_gene(1)
+        self.assertIsNotNone(gene[0])
+
+    def testRandomGeneLength(self):
+        gene = genome.Genome.get_random_gene(20)
+        self.assertEqual(len(gene), 20)
+
+    def testRandGeneIsNumpyArrays(self):
+        gene = genome.Genome.get_random_gene(1)
+        self.assertEqual(type(gene), np.ndarray)
+
+    # Genome
+    def testRandomGenomeExists(self):
+        data = genome.Genome.get_random_genome(20, 5)
+        self.assertIsNotNone(data)
+
+    def testGeneSpecExists(self):
+        spec = genome.Genome.get_gene_spec()
+        self.assertIsNotNone(spec)
+
+    def testGeneSpecHasLinkLength(self):
+        spec = genome.Genome.get_gene_spec()
+        self.assertIsNotNone(spec['link-length'])
+
+    def testGeneSpecHasLinkIndex(self):
+        spec = genome.Genome.get_gene_spec()
+        self.assertIsNotNone(spec['link-length']["ind"])
+
+    def testGeneSpecScale(self):
+        spec = genome.Genome.get_gene_spec()
+        gene = genome.Genome.get_random_gene(len(spec))
+        # print(spec)
+        # print(gene)
+        self.assertGreater(gene[spec["link-length"]["ind"]], 0)
+
+    def testFlatLinks(self):
+        links = [
+            genome.URDFLink(name="A", parent_name=None, recur=1),
+            genome.URDFLink(name="B", parent_name="A", recur=1),
+            genome.URDFLink(name="C", parent_name="B", recur=2),
+            genome.URDFLink(name="D", parent_name="C", recur=1),
+        ]
+        self.assertIsNotNone(links)
+
+    def testExpandLink(self):
+        links = [
+            genome.URDFLink(name="A", parent_name="None", recur=1),
+            genome.URDFLink(name="B", parent_name="A", recur=1),
+            genome.URDFLink(name="C", parent_name="B", recur=2),
+            genome.URDFLink(name="D", parent_name="C", recur=1),
+        ]
+        expanded_links = [links[0]]
+        genome.Genome.expandLinks(
+            links[0], links[0].name, links, expanded_links)
+        names = [l.name + "-parent-is-" +
+                 l.parent_name for l in expanded_links]
+        print(names)
+        self.assertEqual(len(expanded_links), 6)
+
+    def testGeneToGeneDict(self):
+        spec = genome.Genome.get_gene_spec()
+        gene = genome.Genome.get_random_gene(len(spec))
+        gene_dict = genome.Genome.get_gene_dict(gene, spec)
+        self.assertIn("link-recurrence", gene_dict)
+
+    def testGenomeToDict(self):
+        spec = genome.Genome.get_gene_spec()
+        dna = genome.Genome.get_random_genome(len(spec), 3)
+        genome_dicts = genome.Genome.get_genome_dicts(dna, spec)
+        self.assertEqual(len(genome_dicts), 3)
+
+    def testGetLinks(self):
+        spec = genome.Genome.get_gene_spec()
+        dna = genome.Genome.get_random_genome(len(spec), 3)
+        genome_dicts = genome.Genome.get_genome_dicts(dna, spec)
+        links = genome.Genome.genome_to_links(genome_dicts)
+        self.assertEqual(len(genome_dicts), 3)
+
+    def testLinkToXML(self):
+        link = genome.URDFLink(name="A", parent_name="None", recur=1)
+        domimpl = getDOMImplementation()
+        adom = domimpl.createDocument(None, "robot", None)
+        xml_str = link.to_link_element(adom)
+        print(xml_str)
+        self.assertIsNotNone(xml_str)
+
+
+if __name__ == '__main__':
+    unittest.main(argv=['first-arg-is-ignored'], exit=False)